| Protein: | OPT7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 766 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPT7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
773.0 | [0..41] | [766..30] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MEESEQVLPL LTNPKDLTNP SYASSSSSSS EPRDETEDLL LPISDENEEE EEENSPIRQV 60
61 ALTVPTTDDP SLPVLTFRMW VLGTLSCILL SFLNQFFWYR TEPLTISAIS AQIAVVPLGR 120
121 LMAAKITDRV FFQGSKWQFT LNPG
|
| Detection Method: |  |
| Confidence: | 1.11 |
| Match: | 1i3qF |
| Description: | RPB6 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity, transferring phosphorus-containing groups | 2.01281538416671 | bayes_pls_golite062009 |
| binding | 1.94407817286887 | bayes_pls_golite062009 |
| transferase activity | 1.60649038965008 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 1.52156836827301 | bayes_pls_golite062009 |
| RNA polymerase activity | 1.52156836827301 | bayes_pls_golite062009 |
| catalytic activity | 0.853948963582441 | bayes_pls_golite062009 |
| nucleic acid binding | 0.703245359585675 | bayes_pls_golite062009 |
| DNA binding | 0.542083591442061 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.405555358891152 | bayes_pls_golite062009 |
|
Region A: Residues: [145-358] |
1 11 21 31 41 51
| | | | | |
1 PFNVKEHVLI TIFANAGAGS VYAIHVVTVV KAFYMKNITF FVSFIVIVTT QVLGFGWAGI 60
61 FRKYLVEPAA MWWPANLVQV SLFRALHEKE ERTKGGLTRT QFFVIAFVCS FAYYVFPGYL 120
121 FQIMTSLSWV CWFFPSSVMA QQIGSGLHGL GVGAIGLDWS TISSYLGSPL ASPWFATANV 180
181 GVGFVLVIYV LVPICYWLDV YKAKTFPIFS SSLF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [359-430] |
1 11 21 31 41 51
| | | | | |
1 SSQGSKYNIT SIIDSNFHLD LPAYERQGPL YLCTFFAISY GVGFAALSAT IMHVALFHGR 60
61 EIWEQSKESF KE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [431-585] |
1 11 21 31 41 51
| | | | | |
1 KKLDVHARLM QRYKQVPEWW FWCILVTNVG ATIFACEYYN DQLQLPWWGV LLACTVAIIF 60
61 TLPIGIITAI TNQAPGLNII TEYIIGYIYP GYPVANMCFK VYGYISMQQA ITFLQDFKLG 120
121 HYMKIPPRTM FMAQIVGTLI SCFVYLTTAW WLMET
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [586-766] |
1 11 21 31 41 51
| | | | | |
1 IPNICDSVTN SVWTCPSDKV FYDASVIWGL IGPRRIFGDL GLYKSVNWFF LVGAIAPILV 60
61 WLASRMFPRQ EWIKLINMPV LISATSSMPP ATAVNYTTWV LAGFLSGFVV FRYRPNLWQR 120
121 YNYVLSGALD AGLAFMGVLL YMCLGLENVS LDWWGNELDG CPLASCPTAP GIIVEGCPLY 180
181 T
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
