| Protein: | PRK5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 686 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRK5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
363.0 | [0..1] | [665..116] |
|
Region A: Residues: [1-251] |
1 11 21 31 41 51
| | | | | |
1 MRNWEDPFTL ACNTALKKNL PSCIFIIIFI SVLCPVAMSQ VVVPDSDADC LLRFKDTLAN 60
61 GSEFRSWDPL SSPCQGNTAN WFGVLCSNYV WGLQLEGMGL TGKLNLDPLV PMKNLRTISF 120
121 MNNNFNGPMP QVKRFTSLKS LYLSNNRFSG EIPADAFLGM PLLKKILLAN NAFRGTIPSS 180
181 LASLPMLLEL RLNGNQFQGQ IPSFQQKDLK LASFENNDLD GPIPESLRNM DPGSFAGNKG 240
241 LCDAPLSPCS S
|
| Detection Method: |  |
| Confidence: | 14.30103 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [252-355] |
1 11 21 31 41 51
| | | | | |
1 SSPGVPVVPV SPVDPKSTSP PTGKKAGSFY TLAIILIVIG IILVIIALVF CFVQSRRRNF 60
61 LSAYPSSAGK ERIESYNYHQ STNKNNKPAE SVNHTRRGSM PDPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [356-686] |
1 11 21 31 41 51
| | | | | |
1 GRLLFVRDDI QRFDLQDLLR ASAEVLGSGT FGASYKAAIS SGQTLVVKRY KHMNNVGRDE 60
61 FHEHMRRLGR LNHPNILPLV AYYYRREEKL LVTEFMPNSS LASHLHANNS AGLDWITRLK 120
121 IIKGVAKGLS YLFDELPTLT IPHGHMKSSN IVLDDSFEPL LTDYALRPMM SSEHAHNFMT 180
181 AYKSPEYRPS KGQIITKKTD VWCFGVLILE VLTGRFPENY LTQGYDSNMS LVTWVNDMVK 240
241 EKKTGDVFDK EMKGKKNCKA EMINLLKIGL RCCEEEEERR MDMREVVEMV EMLREGESED 300
301 DFGSMDHRGT HNNVYSSMLL DDDDFGFSMN R
|
| Detection Method: | |
| Confidence: | 58.39794 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
