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View Structure Prediction Details

Protein: RBOHA_ARATH
Organism: Arabidopsis thaliana
Length: 902 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RBOHA_ARATH.

Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRSEMQKL GFEHVRYYTE SPYNRGESSA NVATTSNYYG EDEPYVEITL DIHDDSVSVY  60
   61 GLKSPNHRGA GSNYEDQSLL RQGRSGRSNS VLKRLASSVS TGITRVASSV SSSSARKPPR 120
  121 PQLAKLRRSK SRAELALKGL KFITKTDGVT GWPEVEKRFY VMTMTTNGLL HRSRFGECIG 180
  181 MKSTEFALAL FDALARRENV SGDSININEL KEFWKQITDQ DFDSRLRTFF AM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 2f2oA
Description: Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [233-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDKDSDGRLN EAEVREIITL SASANELDNI RRQADEYAAL IMEELDPYHY G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [284-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YIMIENLEIL LLQAPMQDVR DGEGKKLSKM LSQNLMVPQS RNLGARFCRG MKYFLFDNWK  60
   61 RVWVMALWIG AMAGLFTWKF MEYRKRSAYE VMGVCVCIAK GAAETLKLNM AMILLPVCRN 120
  121 TITWLRTKTK LSAIVPFDDS LNFHKVI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [431-902]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIGISVGVGI HATSHLACDF PRLIAADEDQ YEPMEKYFGP QTKRYLDFVQ SVEGVTGIGM  60
   61 VVLMTIAFTL ATTWFRRNKL NLPGPLKKIT GFNAFWYSHH LFVIVYSLLV VHGFYVYLII 120
  121 EPWYKKTTWM YLMVPVVLYL CERLIRAFRS SVEAVSVLKV AVLPGNVLSL HLSRPSNFRY 180
  181 KSGQYMYLNC SAVSTLEWHP FSITSAPGDD YLSVHIRVLG DWTKQLRSLF SEVCKPRPPD 240
  241 EHRLNRADSK HWDYIPDFPR ILIDGPYGAP AQDYKKFEVV LLVGLGIGAT PMISIVSDII 300
  301 NNLKGVEEGS NRRQSPIHNM VTPPVSPSRK SETFRTKRAY FYWVTREQGS FDWFKNVMDE 360
  361 VTETDRKNVI ELHNYCTSVY EEGDARSALI TMLQSLNHAK HGVDVVSGTR VMSHFARPNW 420
  421 RSVFKRIAVN HPKTRVGVFY CGAAGLVKEL RHLSLDFSHK TSTKFIFHKE NF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.154902
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle