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View Structure Prediction Details

Protein: SBT35_ARATH
Organism: Arabidopsis thaliana
Length: 774 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT35_ARATH.

Description E-value Query
Range
Subject
Range
SBT38_ARATH - Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana GN=SBT3.8 PE=3 SV=1
661.0 [0..1] [774..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNCRVLLVL VLSLVIVLNV VRASDESKVH IVYLGEKQHD DPEFVSESHH QMLSSLLGSK  60
   61 VDAHESMVYS YRHGFSGFAA KLTESQAKKL ADSPEVVHVM ADSFYELATT RT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [113-774]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WDYLGLSVAN PNNLLNDTNM GDQVIIGFID TGVWPESESF NDNGVGPIPS HWKGGCESGE  60
   61 KFISTNCNRK LIGAKYFING FLAENEGFNT TESRDYISAR DFIGHGTHTA SIAGGSFVPN 120
  121 ISYKGLAGGN LRGGAPRARI AIYKACWYVD QLGAVACSSS DILKAMDESM HDGVDVLSLS 180
  181 LGAQIPLYPE TDLRDRIATG AFHAVAKGII VVCAGGNSGP AAQTVLNTAP WIITVAATTL 240
  241 DRSFPTPITL GNRKVILGQA LYTGQELGFT SLVYPENAGF TNETFSGVCE RLNLNPNRTM 300
  301 AGKVVLCFTT NTLFTAVSRA ASYVKAAGGL GVIIARNPGY NLTPCRDDFP CVAIDYELGT 360
  361 DVLLYIRSTR SPVVKIQPSR TLVGQPVGTK VATFSSRGPN SISPAILKPD IGAPGVSILA 420
  421 ATSPDSNSSV GGFDILAGTS MAAPVVAGVV ALLKALHPNW SPAAFRSAIV TTAWRTDPFG 480
  481 EQIFAEGSSR KVADPFDYGG GIVNPEKAAD PGLIYDMGPR DYILYLCSAG YNDSSITQLV 540
  541 GNVTVCSTPK TSVLDVNLPS ITIPDLKDEV TLTRTVTNVG TVDSVYKVVV EPPLGIQVVV 600
  601 APETLVFNSK TKNVSFTVRV STTHKINTGF YFGNLIWTDS MHNVTIPVSV RTQILQNYYD 660
  661 EN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle