| Protein: | RD23D_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 378 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RD23D_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
286.0 | [0..1] | [378..1] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MKIFVKTLSG SNFEIEVKPA DKVSDVKTAI ETVKGAEYPA AKQMLIHQGK VLKDETTLEE 60
61 NNVVENSFIV IMLSKTKASP SGASTASAPA PSATQPQTVA TPQVSAPTAS VPVPTSGTAT 120
121 AAAPATAASV QTDVYGQAAS NLVAGTTLES TVQQILDMGG GSWDRDTVVR ALRAAFNNPE 180
181 RAVEYLYSGI PAQAEIPPVA QAPATGEQAA NPLAQPQQAA APAAATGGPN ANPLNLFPQG 240
241 MPAADAGAGA GNLDFLRNSQ QFQALRAMVQ ANPQILQPML QELGKQNPQL VRLIQEHQAD 300
301 FLRLINEPVE GEENVMEQLE AAMPQAVTVT PEEREAIERL EGMGFDRAMV LEVFFACNKN 360
361 EELAANYLLD HMHEFEDQ
|
| Detection Method: |  |
| Confidence: | 58.221849 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
