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View Structure Prediction Details

Protein: KCS11_ARATH
Organism: Arabidopsis thaliana
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS11_ARATH.

Description E-value Query
Range
Subject
Range
gi|115468794, gi... - gi|50725468|dbj|BAD32939.1| putative beta-ketoacyl-CoA synthase [Oryza sativa Japonica Group], gi|12...
488.0 [0..12] [509..19]

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Predicted Domain #1
Region A:
Residues: [1-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS  60
   61 VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV YLVNFSCFKP DESRKCTKKI 120
  121 FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG 180
  181 AIDELLAKTN VNPKDIGILI VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL 240
  241 ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD 300
  301 RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG 360
  361 PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF CIHAGGRAVL DELEKNLKLT 420
  421 EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV 480
  481 RSVNPKKEKN PWMDEIHEFP VEVPKVSTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.154902
Match: 1ee0A
Description: Pyrone synthase (PyS, chalcone synthase 2)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.14505178497871 bayes_pls_golite062009
transferase activity 1.38158753865981 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.12155569250025 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.03445196061197 bayes_pls_golite062009
acyltransferase activity 0.919789551144134 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 0.115776595790057 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle