YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YLS9_ARATH
Organism: Arabidopsis thaliana
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLS9_ARATH.

Description E-value Query
Range
Subject
Range
gi|47971182 - gi|47971182|dbj|BAD22533.1| harpin inducing protein 1-like 9 [Nicotiana tabacum]
249.0 [0..3] [227..2]

Back

Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEQPLNGA FYGPSVPPPA PKGYYRRGHG RGCGCCLLSL FVKVIISLIV ILGVAALIFW  60
   61 LIVRPRAIKF HVTDASLTRF DHTSPDNILR YNLALTVPVR NPNKRIGLYY DRIEAHAYYE 120
  121 GKRFSTITLT PFYQGHKNTT VLTPTFQGQN LVIFNAGQSR TLNAERISGV YNIEIKFRLR 180
  181 VRFKLGDLKF RRIKPKVDCD DLRLPLSTSN GTTTTSTVFP IKCDFDF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.54
Match: 1xo8A
Description: Solution structure of AT1g01470 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle