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View Structure Prediction Details

Protein: gi|30267793, gi|...
Organism: Arabidopsis thaliana
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30267793, gi|....

Description E-value Query
Range
Subject
Range
gi|13569550, gi|... - gi|4585909|gb|AAD25570.1| expressed protein [Arabidopsis thaliana], pir||D84526 hypothetical protein...
388.0 [0..1] [225..1]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACHKIFLVI SLMLAVSLVS AVDFSVVDNT GDSPGGRRFR NEIGGVSYGE QSLRDATDFT  60
   61 WRLFQQTNPS DRKDVTKITL FMENSNGIAY SSQDEIHYNA GSLVDDKGYV RRGFTGVVYH 120
  121 EVVHSWQWNG AGRAPGGLIE GIADYVRLKA GYVASHWVRP GGGDRWDQGY DVTARFLEYC 180
  181 NDLRNGFVAE LNKKMRSDYN DGFFVDLLGK DVNQLWREYK ANYGQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.44
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle