| Protein: | gi|42570751, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 361 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42570751, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
582.0 | [0..16] | [360..46] |
|
|
565.0 | [0..16] | [360..50] |
|
|
563.0 | [0..19] | [360..52] |
|
|
543.0 | [0..16] | [360..46] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA 60
61 ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW RELEPYVSKF VILESNTTFT 120
121 GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG 180
181 VSDGDAVIMS DADEI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [196-251] |
1 11 21 31 41 51
| | | | | |
1 PSPHTVKFLQ WCDGIPDVMH LEMREYMYSF EFPVDYSSWR ASVHIYSRKW TQYRHS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.829 | N/A | N/A | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.823 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.759 | N/A | N/A | a.217.1 | Description not found. |
| View | Download | 0.753 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.748 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.731 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.731 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.667 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.557 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.498 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.491 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [252-361] |
1 11 21 31 41 51
| | | | | |
1 RQTDLILSDA GWHCSFCFRR LNEFVFKMKG YSHADRVKRK EFLDYQRIQK HICKGYDLFD 60
61 MLPEKYSFQE LISKIGPIPP SASAVHLPAF LIQNAARFRF LLPGGCLREP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.397 | a.74.1 | Cyclin-like |
| View | Download | 0.266 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.266 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.251 | c.10.1 | RNI-like |
| View | Download | 0.251 | c.10.1 | RNI-like |
| View | Download | 0.250 | a.4.12 | TrpR-like |
| View | Download | 0.249 | a.60.8 | HRDC-like |
| View | Download | 0.208 | a.1.1 | Globin-like |
