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View Structure Prediction Details

Protein: B3GT3_ARATH
Organism: Arabidopsis thaliana
Length: 409 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GT3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21360399, gi|... - pir||A86186 hypothetical protein [imported] - Arabidopsis thaliana, gi|2388580|gb|AAB71461.1| Simil...
348.0 [0..1] [409..1]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKIKGELF PSRSLVSKKW TFLLCFGSFC FGILFTDRMW IIPESKDMPR PSVSTEAERL  60
   61 KLISEGCDPK TLYQKEVNRD PQALFGEVSK THNAIQTLDK TISSLEMELA AARSAQESLV 120
  121 NGAPISND

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKQLPGKR RYLMVVGINT AFSSRKRRDS VRTTWMPSGE KRKKLEEEKG IIIRFVIGHS  60
   61 ATAGGILDRS IEAEDKKHGD FLRLDHVEGY LELSGKTKTY FSTAVSKWDA EFYVKVDDDV 120
  121 HVNIATLGET LVRHRKKHRV YLGCMKSGPV LSQKGVRYHE PEYWKFGENG NKYFRHATGQ 180
  181 LYAISRDLAS YISLNQHVLH KYANEDVTLG AWFIGLDVTH IDDRRLCCGT PPDCEWKAQA 240
  241 GNICVASFDW TCSGICRSAD RIKEVHKRCG EPENAIWKAR F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.154902
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle