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View Structure Prediction Details

Protein: gi|18404890, gi|...
Organism: Arabidopsis thaliana
Length: 73 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18404890, gi|....

Description E-value Query
Range
Subject
Range
IER1_SOLLC - Ethylene-responsive proteinase inhibitor 1 OS=Solanum lycopersicum PE=3 SV=1
113.0 [0..1] [73..46]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEWCSYIG KNSWPELLGT NGDYAASVIK GENSSLNVVV VSDGNYVTED LSCYRVRVWV  60
   61 DEIRIVVRNP TAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.045757
Match: 1mitA
Description: RECOMBINANT CUCURBITA MAXIMA TRYPSIN INHIBITOR V (RCMTI-V) (NMR, MINIMIZED AVERAGE STRUCTURE)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle