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View Structure Prediction Details

Protein: TIR1L_ARATH
Organism: Arabidopsis thaliana
Length: 619 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIR1L_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
306.0 [0..36] [617..12]

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Predicted Domain #1
Region A:
Residues: [1-619]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQDRSEMSE DDDDQQSPPL DLPSTAIADP CSSSSSPNKS RNCISNSQTF PDHVLENVLE  60
   61 NVLQFLDSRC DRNAASLVCK SWWRVEALTR SEVFIGNCYA LSPARLTQRF KRVRSLVLKG 120
  121 KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL 180
  181 ILVCCEGFGT SGISIVANKC RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE 240
  241 APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ 300
  301 EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC 360
  361 HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED SEGPVSELGL QAISEGCRKL 420
  421 ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL 480
  481 TRLAVSGLLT DQAFRYMGEY GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG 540
  541 DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY 600
  601 MYRSLDGPRN DAPKFVTIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle