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View Structure Prediction Details

Protein: PUP22_ARATH
Organism: Arabidopsis thaliana
Length: 394 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP22_ARATH.

Description E-value Query
Range
Subject
Range
PUP17_ARATH - Probable purine permease 17 OS=Arabidopsis thaliana GN=PUP17 PE=2 SV=2
172.0 [0..1] [394..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMTEASKHT TTHEESEHVQ NPEPDQVLSQ RQLLQLNQKK WWISVLICLF LVLLGDSLVI  60
   61 LLLNFFYVQD RREDNNQDLQ YKGTWMQALI QNAAFPILIP LFFIFPSPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNPETINTRF LSIRLILLYF SLGVLVAAHS KLYALGKLYS SYGFFMLISG SQLIFTLIFT  60
   61 AIINRFKFTR WIIISIVLIL VSYAFGGPVF SGEPDENE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.09
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [208-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFYGIQAWLT FAASVAFALS LCLVQLSFEK LLVKTKRYGN KKVFRMVLEM QICVSSVASV  60
   61 VCLVGLFASG EYKELKGDSE RFKKGETYYV LSLVGLALSW QVWAVGLIGL VLYVSSVFSN 120
  121 IVHMCASPLM AFIVVLAFDF IDDDFSWPRI GALIGSVLAL GSYFYTLHKR NKKKMVEFNQ 180
  181 SENNVEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle