| Protein: | RD23C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RD23C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..1] | [419..1] |
|
Region A: Residues: [1-419] |
1 11 21 31 41 51
| | | | | |
1 MKIFVKTLKG THFEIEVKPE DSVVDVKKNI ESVQGADVYP AAKQMLIHQG KVLKDETTIE 60
61 ENKVAENSFI VIMMNKSKPA SAAASSASAG TSQAKSIPPS TSQPSISPQT PASVSAPVAP 120
121 APTRPPPPAP TPTPAPVAAT ETVTTPIPEP VPATISSSTP APDSAPVGSQ GDVYGQAASN 180
181 LAAGSNLEST IQQILDMGGG TWDRETVVLA LRAAFNNPER AVEYLYTGIP EQAEVPPVAR 240
241 PPASAGQPAN PPAQTQQPAA APASGPNANP LDLFPQGLPN VGGNPGAGTL DFLRNSQQFQ 300
301 ALRAMVQANP QVLQPMLQEL GKQNPNLMRL IQDHQADFLR LINEPVEGGG ESGNLLGQMA 360
361 AGMPQPQAIQ VTHEEREAIE RLEAMGFERA LVLEVFFACN KNEELAANYL LDHMHEFEE
|
| Detection Method: |  |
| Confidence: | 52.045757 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| damaged DNA binding | 2.05780812338496 | bayes_pls_golite062009 |
| protein binding | 0.897574980847268 | bayes_pls_golite062009 |
| binding | 0.85419199411198 | bayes_pls_golite062009 |
