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View Structure Prediction Details

Protein: TI171_ARATH
Organism: Arabidopsis thaliana
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TI171_ARATH.

Description E-value Query
Range
Subject
Range
TI172_ARATH - Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana GN=TIM17-2 P...
229.0 [0..1] [218..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTPESSREP CPDRILDDVG GAFAMGAVGG SAYHLIRGIY NSPGGARLSG GVQALRMSGP  60
   61 RSGGSFSVWG GLYSTFDCAL VYARQKEDPW NSILSGAATG GFLSLRQGLG ASARSALVGG 120
  121 VLLAMIEGVG IMLNKVQSTA HNEQFMEDHA ATSLPYGMGQ ISGQSVPVPE TSSSSSGSVS 180
  181 WFGSLFKKKK ETEDHHSESR THILESFDAP PVPTYEFK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle