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View Structure Prediction Details

Protein: gi|9955511, gi|2...
Organism: Arabidopsis thaliana
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9955511, gi|2....

Description E-value Query
Range
Subject
Range
gi|42570512 - gi|42570512|ref|NP_850798.2| transcriptional coactivator p15 (PC4) family protein [Arabidopsis thali...
137.0 [0..1] [110..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENGKRKDE DVRASDDRDE SETHAPPKKV AKPADEIEDI FICNLDKNRR VFVRNCNGRI  60
   61 WIAIRQFFVK DGITLPCNSK QGISLSLEQW NDLRNHEEDI DKALSELSEV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.39794
Match: 1pcfA
Description: Transcriptional coactivator PC4 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle