| Protein: | BOB1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOB1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
325.0 | [0..9] | [304..4] |
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325.0 | [0..9] | [304..4] |
|
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324.0 | [0..9] | [304..4] |
|
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323.0 | [0..9] | [304..4] |
|
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321.0 | [0..9] | [304..4] |
|
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318.0 | [0..9] | [304..4] |
|
|
291.0 | [0..11] | [304..6] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MAIISEVEEE SSSSRPMIFP FRATLSSANP LGFLEKVFDF LGEQSDFLKK PSAEDEIVVA 60
61 VRAAKEKLKK AEKKKAEKES VKPVEKKAEK EIVKLVEKKV EKESVKPTIA ASSAEPIEVE 120
121 KPKEEEEKKE SGPIVPNKGN G
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.858 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.620 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.597 | N/A | N/A | f.56.1 | Description not found. |
| View | Download | 0.578 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.544 | N/A | N/A | a.7.12 | Description not found. |
| View | Download | 0.543 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.538 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.517 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.492 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.457 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.286 | N/A | N/A | c.36.1 | Thiamin diphosphate-binding fold (THDP-binding) |
| View | Download | 0.258 | N/A | N/A | d.118.1 | N-acetylmuramoyl-L-alanine amidase-like |
|
Region A: Residues: [142-247] |
1 11 21 31 41 51
| | | | | |
1 TDLENYSWIQ NLQEVTVNIP VPTGTKARTV VCEIKKNRLK VGLKGQDPIV DGELYRSVKP 60
61 DDCYWNIEDQ KVISILLTKS DQMEWWKCCV KGEPEIDTQK VEPETS
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 1wfiA |
| Description: | Nuclear move domain of nuclear distribution gene C homolog |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [248-304] |
1 11 21 31 41 51
| | | | | |
1 KLGDLDPETR STVEKMMFDQ RQKQMGLPTS EELQKQEILK KFMSEHPEMD FSNAKFN
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.749 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.715 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.708 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.708 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.687 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.636 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.630 | N/A | N/A | a.2.19 | Description not found. |
| View | Download | 0.627 | N/A | N/A | a.2.19 | Description not found. |
| View | Download | 0.623 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
