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View Structure Prediction Details

Protein: PILR2_ARATH
Organism: Arabidopsis thaliana
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PILR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
228.0 [0..9] [317..2]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKETNFGEKT RVLVVGGTGS LGRRIVSACL AEGHETYVLQ RPEIGVDIEK VQLLLSFKRL  60
   61 GAHLVEGSFS DHQSLVSAVK QVDVVVSAMS GVHFRTHNIP VQLKLVAAIK EAGNVKRFLP 120
  121 SEFGMDPSRM GHAMPPGSET FDQKMEIRNA IKAAGISHTY LVGACFAAYF GGNLSQMGTL 180
  181 FPPKNKVDIY GDGNVKVVFV DEDDMAKYTA KTLNDPRTLN KTVYVRPTDN ILTQMELVQI 240
  241 WEKLTEKELE KTYVSGNDFL ADIEDKEISH QAGLGHFYHI YYEGCLTDHE VGDDEEATKL 300
  301 YPDVKYKRMD EYLKIFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 1qydA
Description: Crystal structures of pinoresinol-lariciresinol and phenylcoumaran benzylic ether reductases, and their relationship to isoflavone reductases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.26736023026862 bayes_pls_golite062009
oxidoreductase activity 0.68812524232244 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle