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View Structure Prediction Details

Protein: gi|7485653, gi|4...
Organism: Arabidopsis thaliana
Length: 645 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7485653, gi|4....

Description E-value Query
Range
Subject
Range
gi|37223342 - gi|37223342|gb|AAQ90244.1| DEM2 [Lycopersicon esculentum]
881.0 [0..1] [645..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASHSHEDL EICSSDEDEY EEYEEGREGE EEEETFQDSR DDTLGISSSG GRRLRPKSPS  60
   61 SSLDDVEAKL QALKLKYPLT QSAPSTQNSA RLFRYINGNT PKAKWVTAEK LTAYCFVKTN 120
  121 KGDEDDEDDD ENGDVENEWW ILKVGSKIRE KVSDEMQLKA YKDQR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [166-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVDFVAKAVW AMKFASSEDF SVFVSSYNNC LFENNHGVEF NEANKAKIYG KDFIGWANPE  60
   61 AADDSMWEDA DDILLQSPGG GSATPARDTQ DLTEAFEEAT SEGIHSLALG ALDNSFLVGD 120
  121 SGIQVFKNMR QGIQGKGVCV NFEPGYGRTH SSAPKKALLM RAETNMLLMS PMSQTPHSRG 180
  181 IHQLDIETGK IISEWKFEKD GVDISMSDIT NDGKGAQLDP SASTFLGLDN NRLCRWDMRD 240
  241 RYGMVQDLAT ANTPVLNWAQ GHQFSRGTNF QCFATTGDGS IVVGSLDGKI RLYSSNTMRQ 300
  301 AKTAFPGLGA PVTHVDATFD GKWIVGTTDT YLIVICTLFT DKSGKTKTGF EGRMGNKIAA 360
  361 PRLLKLRPLD AHLAGSDNKF RNAQFSWVTE DGKQERHVVA TVGKFSVIWN FQQVKNGSHE 420
  421 CYHDQEGLKK CYCYKIVLRN ESIVDSRFMN DNFAISGSPE APLVIATPMK VSSFSLSSKR 480
  481 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.33
Match: 2j04B
Description: No description for 2j04B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle