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View Structure Prediction Details

Protein: TCP20_ARATH
Organism: Arabidopsis thaliana
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCP20_ARATH.

Description E-value Query
Range
Subject
Range
gi|33591198 - gi|33591198|gb|AAQ23103.1| cycloidea-like protein group 1A [Lupinus digitatus]
225.0 [0..10] [246..20]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPKNLNRHQ VPNFLNPPPP PRNQGLVDDD AASAVVSDEN RKPTTEIKDF QIVVSASDKE  60
   61 PNKKSQNQNQ LGPKRSSNKD RHTKVEGRGR RIRMPALCAA RIFQLTRELG HKSDGETIQW 120
  121 LLQQAEPSII AATGSGTIPA SALASSAATS NHHQGGSLTA GLMISHDLDG GSSSSGRPLN 180
  181 WGIGGGEGVS RSSLPTGLWP NVAGFGSGVP TTGLMSEGAG YRIGFPGFDF PGVGHMSFAS 240
  241 ILGGNHNQMP GLELGLSQEG NVGVLNPQSF TQIYQQMGQA QAQAQGRVLH HMHHNHEEHQ 300
  301 QESGEKDDSQ GSGR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 70.161151
Match: PF03634.4
Description: No description for PF03634.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle