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View Structure Prediction Details

Protein: gi|15228555, gi|...
Organism: Arabidopsis thaliana
Length: 295 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228555, gi|....

Description E-value Query
Range
Subject
Range
gi|215694908, gi... - gi|50939409|ref|XP_479232.1| leucine zipper protein-like [Oryza sativa (japonica cultivar-group)], g...
313.0 [0..13] [290..21]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSPVSARF DIFEIYRRFC AIRSGQQLCN KKPCDGEESQ RFNLSKEAIT QLLYLVENKF  60
   61 QARNSIFDEL FKLMSRLDLM VDFTEFTCFY DFVFFMCREN GQKNITISRA ITAWKLVLAG 120
  121 RFRLLNRWCD FIEKNQRHNI SEDTWQQVLA FSRCVHENLE GYDSEGAWPV LIDDFVEHMY 180
  181 SILGPNKDTS LFCK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.154902
Match: 2is9A
Description: No description for 2is9A was found.

Predicted Domain #2
Region A:
Residues: [195-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CGDTESESCL YQEDEHHKDY RRPHTGLRNI PGLKRKTSKK NDEEEEDEDE EVLETQNSSS  60
   61 LLNFKRIKTS NSPRCSSKSP CSIERSLSQG FASLLSTGDK P

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.420216
Match: PF03556.6
Description: No description for PF03556.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle