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View Structure Prediction Details

Protein: ACR11_ARATH
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR11_ARATH.

Description E-value Query
Range
Subject
Range
GLND_VIBPA - Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Vibrio parahaemolyticus serotype O3:K6 ...
GLND_VIBPA - [Protein-PII] uridylyltransferase OS=Vibrio parahaemolyticus GN=glnD PE=3 SV=1
223.0 [0..9] [282..616]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMASASGSA LCFTDASSSL ALRRDCGALC LPPRTVTFGF VDKPLVNLER LRLSTLKIRA  60
   61 SNATAVENGK QEGSAADSDK VPTPVVIIDQ DSDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DATVLEVTFG DRLGALLDTM NALKNLGLNV VKANVYLDSS GKHNKFAITR ADSGRKVEDP  60
   61 ELLEAIRLTV INNLLEFHPE SSSQLAMGAA FGVLPPTEPI DVDIATHITI EDDGPDRSLL 120
  121 FIESADRPGL LVELVKIISD ISVAVESGEF DTEGLLAKVK FHVSYRNKAL IKPLQQVLAN 180
  181 SLRYFLRRPS TDESSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.115197515122073 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle