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View Structure Prediction Details

Protein: WDR55_ARATH
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WDR55_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
434.0 [0..4] [353..1170]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDLGANAF GIDFHPSTNL VAAGLIDGHL HLYRYDSDSS LVRERKVRAH KESCRAVRFI  60
   61 DDGQRIVTAS ADCSILATDV ETGAQVAHLE NAHEDAVNTL INVTETTIAS GDDKGCVKIW 120
  121 DTRQRSCSHE FNAHEDYISG MTFASDSMKL VVTSGDGTLS VCNLRTSKVQ SQSEFSEDEL 180
  181 LSVVIMKNGR KVICGTQNGT LLLYSWGFFK DCSDRFVDLA PNSVDALLKL DEDRLITGCD 240
  241 NGIISLVGIL PNRIIQPIGS HDYPIEDLAL SHDKKFLGST AHDSMLKLWN LEEILEGSNV 300
  301 NSGNASGAAE DSDSDNDGMD LDNDPSKSSK GSKRKTKSKA NTLNATNNFF ADL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle