| Protein: | gi|8920577, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8920577, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..1] | [418..1] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MALESNAPVV DPNTIGNSFV EKYYNLLYKS PSQVHQFYLD DSVLGRPGSD GEMVSVKSLK 60
61 AINEQIMSFD YEISKIQILT ADSQASYMNG VVTLVTGLLT VKEGQRMRFS QSFFLVPLNG 120
121 SYFVLNDVFR YVADEIVEPE ANKKEVE
|
| Detection Method: |  |
| Confidence: | 29.221849 |
| Match: | 1qmaA |
| Description: | Nuclear transport factor-2 (NTF2) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [148-428] |
1 11 21 31 41 51
| | | | | |
1 EVIPQVVQPT EQVDEVAEPV TIPTQQPEAK QTTENTVKKP ERAVANGHPK TQEDNVVNDK 60
61 SNGVDAPKKS FAHIVQDLAQ NGATFNAKAS PAKPKSKPVT KPSAARESKA PAPVSEHSSA 120
121 ATIDQQAEGY TIFVANLLMD ATPEQLNETF KGFGAITKDG IQVRSYRLKG NCFGFVTFAS 180
181 AEAVKLVLQA HKESAIRIGN RRVSIEEKRG NNDNGRPAMR NGGYRNDNGY RNDGYRPRGN 240
241 GSNGGRGYGR NGSERRGESR NGEAHNGDGK VHQNGTVEAS R
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
