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View Structure Prediction Details

Protein: gi|17529264, gi|...
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17529264, gi|....

Description E-value Query
Range
Subject
Range
gi|62663393, gi|... - gi|62663393|ref|XP_214448.3| PREDICTED: hypothetical protein [Rattus norvegicus], gi|109505620|ref|X...
237.0 [0..8] [230..193]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSKRLALL GAQSAITLAK PRGLGSSLGL LDRRPFPYRQ FSELTKANGR RAFLVDTLAL  60
   61 VRSLEAQGVP SKQAEAITSA ITEVLNDSLE NVSESFVSKA EMQKIEMIQD SNLSKFKSEV 120
  121 KSSQEHHFTV LQRETEKLRG DIEKMRSELR YEIDKVTAGQ RLDLNLERGR IRDELANQNT 180
  181 ETTNLTNKLD REIHALRAQL EASKYEVIKY CIGTLVSISA VGLAVLRIMI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle