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View Structure Prediction Details

Protein: GDL67_ARATH
Organism: Arabidopsis thaliana
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL67_ARATH.

Description E-value Query
Range
Subject
Range
gi|115452627, gi... - gi|125586020|gb|EAZ26684.1| hypothetical protein OsJ_10588 [Oryza sativa Japonica Group], gi|1154526...
329.0 [0..3] [361..4]

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Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFLLTWII MTVALSVTLF LMPQQTNAAR AFFVFGDSLV DSGNNNYLVT TARADSPPYG  60
   61 IDYPTGRPTG RFSNGLNLPD IISEQIGSEP TLPILSPELT GEKLLIGANF ASAGIGILND 120
  121 TGVQFLNILR IGRQFELFQE YQERVSEIIG SDKTQQLVNG ALVLMTLGGN DFVNNYFFPI 180
  181 STRRRQSSLG EFSQLLISEY KKILTSLYEL GARRVMVTGT GPLGCVPAEL ASSGSVNGEC 240
  241 APEAQQAAAI FNPLLVQMLQ GLNREIGSDV FIGANAFNTN ADFINNPQRF GFVTSKVACC 300
  301 GQGAYNGQGV CTPLSTLCSD RNAYAFWDPF HPTEKATRLI VQQIMTGSVE YMNPMNLSTI 360
  361 MALDSRI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.1
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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