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View Structure Prediction Details

Protein: CX5B2_ARATH
Organism: Arabidopsis thaliana
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CX5B2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592567 - gi|21592567|gb|AAM64516.1| cytochrome c oxidase subunit, putative [Arabidopsis thaliana]
239.0 [0..1] [157..1]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRRIVSSHL KSISAVGSCA APSCRHAVVE STHLSLSTRA SSIPAYSSIF SRLIGSAAAD  60
   61 TAVKKRVEDV MPIATGHEKE ELQAELEGRK LDDIDFPEGP FGTKEAPAVV KSYYDMRIVG 120
  121 CPGGEGEDEH DVVWFWLEKG KSFECPVCTQ YFKLEVVGPG GPPDGHGDDH H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.09691
Match: 1occF
Description: Cytochrome c oxidase Subunit F
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle