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View Structure Prediction Details

Protein: HS178_ARATH
Organism: Arabidopsis thaliana
Length: 157 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HS178_ARATH.

Description E-value Query
Range
Subject
Range
gi|8671873 - gi|8671873|gb|AAF78436.1|AC018748_15 Contains similarity to 17.6 KD class I heat shock protein from ...
171.0 [0..1] [157..247]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV  60
   61 FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW HRVERSSGQF SRKFKLPENV 120
  121 KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

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Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.20758866613061 bayes_pls_golite062009
catalytic activity 0.63074808892513 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle