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View Structure Prediction Details

Protein: SAU41_ARATH
Organism: Arabidopsis thaliana
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAU41_ARATH.

Description E-value Query
Range
Subject
Range
gi|162459692, gi... - gi|6906857|gb|AAF31170.1|AF148498_1 unknown [Zea mays], gi|162459692|ref|NP_001105573.1| small auxin...
150.0 [0..14] [147..19]
gi|3096945, gi|7... - pir||T05296 probable auxin-induced protein T4L20.340 - Arabidopsis thaliana, gi|7270427|emb|CAB80193...
143.0 [0..21] [118..8]
gi|24943206 - gi|24943206|gb|AAN65371.1| auxin-regulated protein [Phaseolus vulgaris]
138.0 [0..1] [129..18]
gi|115460424, gi... - gi|50928599|ref|XP_473827.1| OSJNBa0060N03.10 [Oryza sativa (japonica cultivar-group)], gi|38567890|...
gi|125549652, gi... - gi|125549652|gb|EAY95474.1| hypothetical protein OsI_17317 [Oryza sativa Indica Group], gi|116310116...
136.0 [0..1] [139..26]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHLIRRLSR VADSSSEFSI RRSTSSFRNR RGHHRLHAPP PPWSICPARR VNTVPAGHVP  60
   61 VYVGEEMERF VVSAELMNHP IFVGLLNRSA QEYGYAQKGV LHIPCHVIVF ERVVETLRLG 120
  121 GFEGSGDLEN LVASLLSGDE LIPETTE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.19382
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle