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View Structure Prediction Details

Protein: gi|28393132, gi|...
Organism: Arabidopsis thaliana
Length: 203 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28393132, gi|....

Description E-value Query
Range
Subject
Range
gi|24417332 - gi|24417332|gb|AAN60276.1| unknown [Arabidopsis thaliana]
170.0 [0..1] [203..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS  60
   61 LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS RLKPKEVSAM RDCVEELGDT 120
  121 LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR 180
  181 ILVIAHLTSN ALALINHFAS IHG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle