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View Structure Prediction Details

Protein: M2K3_ARATH
Organism: Arabidopsis thaliana
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for M2K3_ARATH.

Description E-value Query
Range
Subject
Range
gi|99083579 - gi|99083579|gb|ABF55663.2| double MYC-tagged mitogen activated protein kinase kinase 3 [synthetic co...
388.0 [0..1] [520..1]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALEELKKK LSPLFDAEKG FSSSSSLDPN DSYLLSDGGT VNLLSRSYGV YNFNELGLQK  60
   61 CTSSHVDESE SSETTYQCAS HEMRVFGAIG SGASSVVQRA IHIPNHRILA LKKINIFERE 120
  121 KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMNGGSLAD ILKVTKKIPE 180
  181 PVLSSLFHKL LQGLSYLHGV RHLVHRDIKP ANLLINLKGE PKITDFGISA GLENSMAMCA 240
  241 TFVGTVTYMS PERIRNDSYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS 300
  301 PTPPKQEFSP EFCSFIDACL QKDPDARPTA DQLLSHPFIT KHEKERV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.221849
Match: 1f3mC
Description: pak1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [348-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLATFVQSIF DPTQRLKDLA DMLTIHYYSL FDGFDDLWHH AKSLYTETSV FSFSGKHNTG  60
   61 STEIFSALSD IRNTLTGDLP SEKLVHVVEK LHCKPCGSGG VIIRAVGSFI VGNQFLICGD 120
  121 GVQAEGLPSF KDLGFDVASR RVGRFQEQFV VESGDLIGKY FLAKQELYIT NLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle