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View Structure Prediction Details

Protein: gi|110743893, gi...
Organism: Arabidopsis thaliana
Length: 154 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110743893, gi....

Description E-value Query
Range
Subject
Range
gi|75704573, gi|... - gi|75910848|ref|YP_325144.1| hypothetical protein Ava_4652 [Anabaena variabilis ATCC 29413], gi|7570...
123.0 [0..1] [149..2]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVMLIIDE SNASYDLLIW ALENQKDTIE SSKVYIFAKQ PQNSFTPPTV LSSSVGFAQI  60
   61 FYPFSPNSEL IRLAQEKNMK IALGILEKAK KICLNHGIKA ETFTDDGDPK DLIRKIIQER 120
  121 NINLIVTSDQ QSLKKCTQNT DCSLLVVKKR LRKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1mjhA
Description: "Hypothetical" protein MJ0577
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.298809327772818 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle