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View Structure Prediction Details

Protein: CNIH1_ARATH
Organism: Arabidopsis thaliana
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNIH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|109105438 - gi|109105438|ref|XP_001118044.1| PREDICTED: similar to cornichon homolog 2 [Macaca mulatta]
179.0 [0..13] [134..147]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL  60
   61 CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF RGISFEKKLR YTKLGFYVFL 120
  121 FIMVVFRLTL SAVYSFTEDD DLLHLF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.0
Match: PF03311.5
Description: No description for PF03311.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle