YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|11357621, gi|...
Organism: Arabidopsis thaliana
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11357621, gi|....

Description E-value Query
Range
Subject
Range
gi|21593563 - gi|21593563|gb|AAM65530.1| unknown [Arabidopsis thaliana]
426.0 [0..1] [298..1]

Back

Predicted Domain #1
Region A:
Residues: [1-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPYGIKVN KRKEREERYD KEEDEVEEQP KFEQKQKARE SSKKAKKEST SRAEEDNDEE  60
   61 EVTVEATAAA EDIVGGIPIV LNAPNKEKSG IVFVLEKASL EVAKVGKTYQ LLNSDDHANF 120
  121 LKKNNRNPAD YRPDITHQAL LMILDSPVNK AGRLKAVYVR TEKGVLFEVK PHVRIPRTFK 180
  181 RFAGIMLQLL QKLSITAVNS REKLLRCVKN PIEEHHLPVN SHRIGFSHSS EKLVNMQKHL 240
  241 ATVCDDDRDT VFVVGAMAHG KIDCNYIDEF VSVSEYPLSA AYCISRICEA LATNWNII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.30103
Match: 2v3kA
Description: No description for 2v3kA was found.

Predicted functions:

Term Confidence Notes
RNA methyltransferase activity 3.73300070859272 bayes_pls_golite062009
tRNA methyltransferase activity 2.75506106783732 bayes_pls_golite062009
methyltransferase activity 2.52574509568717 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 2.44351066049012 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 2.00166711852993 bayes_pls_golite062009
RNA binding 1.99948490385053 bayes_pls_golite062009
tRNA (guanine) methyltransferase activity 1.9680534181971 bayes_pls_golite062009
rRNA methyltransferase activity 1.94772102267592 bayes_pls_golite062009
binding 1.07947949398964 bayes_pls_golite062009
nucleic acid binding 0.987186921436979 bayes_pls_golite062009
catalytic activity 0.797300463760338 bayes_pls_golite062009
transferase activity 0.489526737652591 bayes_pls_golite062009
rRNA (guanine) methyltransferase activity 0.425953878527171 bayes_pls_golite062009
protein binding 0.303628351374506 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle