YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: 4CLL1_ARATH
Organism: Arabidopsis thaliana
Length: 542 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 4CLL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|77996178, gi|... - gi|78044063|ref|YP_360551.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus hydrogenoformans Z-...
540.0 [0..4] [542..6]

Back

Predicted Domain #1
Region A:
Residues: [1-542]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQKQEDNE YIFRSLYPSV PIPDKLTLPE FVLQGVEEYT ENVAFVEAVT GKAVTYGDVV  60
   61 RDTKRLAKAL TSLGLRKGQV MVVVLPNVAE YGIIALGIMS AGGVFSGANP TALVSEIKKQ 120
  121 VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ 180
  181 TDLCALPFSS GTTGLQKGVM LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV 240
  241 GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL 300
  301 KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV 360
  361 GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF MNKEETDKTI DEQGWLHTGD 420
  421 IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA 480
  481 ACVVINPKAT EKEEDILNFV AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN 540
  541 KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 107.0
Match: 2d1qA
Description: No description for 2d1qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle