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View Structure Prediction Details

Protein: PME67_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME67_ARATH.

Description E-value Query
Range
Subject
Range
gi|222637676, gi... - gi|50939939|ref|XP_479497.1| putative pectinesterase [Oryza sativa (japonica cultivar-group)], gi|50...
387.0 [0..18] [338..247]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHRTRMILV LTLVVMSIWG SDASAMQKTK FDAPLLTEKI ATNRSIIVDI EGKGDYTSVQ  60
   61 KAIDAVPVGN SNWIIVHVRK GIYKERVHIP ENKPFIFMRG NGKGKTVIES SQSSVDNVAS 120
  121 ATFKVEANHF VAFGISIRND APVGMAFTSE NQSVAAFVAA DKVAFYHCAF YSLHNTLFDN 180
  181 KGRHYYHECY IQGSIDFIFG RATSIFNNCE IFVISDKRVK PYGSITAHHR ESAEEKTGYV 240
  241 FIRGKVYGID EVYLGRAKGP YSRVIFAKTY LSKTVVPDGW TNWSYHGSTQ NLYHGEYKCH 300
  301 GPGAERQKRS DWAKDLTKQE VESFLSIDFI DGTSWLPVWL QEKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.221849
Match: 1xg2A
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle