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View Structure Prediction Details

Protein: gi|15239754, gi|...
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15239754, gi|....

Description E-value Query
Range
Subject
Range
gi|218189681 - gi|218189681|gb|EEC72108.1| hypothetical protein OsI_05080 [Oryza sativa Indica Group]
gi|57899589, gi|... - gi|57899618|dbj|BAD87245.1| putative mitochondrial deoxynucleotide carrier [Oryza sativa Japonica Gr...
302.0 [0..9] [334..4]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR  60
   61 GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM PYTSIQFTVL HKLKSFASGS 120
  121 TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ 180
  181 SRGIRGLYNG LTPTLVEIVP YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ 240
  241 LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE 300
  301 GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle