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View Structure Prediction Details

Protein: ICLN_ARATH
Organism: Arabidopsis thaliana
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ICLN_ARATH.

Description E-value Query
Range
Subject
Range
gi|115481276, gi... - gi|222612504|gb|EEE50636.1| hypothetical protein OsJ_30846 [Oryza sativa Japonica Group], gi|2157684...
gi|218184193 - gi|218184193|gb|EEC66620.1| hypothetical protein OsI_32859 [Oryza sativa Indica Group]
242.0 [0..1] [229..1]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGLRDFTL RTEDGSGKPV LDESNGEELM HVQTSVAVAL GNRPIESPGT LYITSRKLIW  60
   61 LSDVDMAKGY AVDFLSISLH AVSRDPEAYS SPCIYTQIEV EEDEDDESDS ESTEVLDLSK 120
  121 IREMRLVPSD STQLETLFDV FCECAELNPE PVQEEEEESG HNWVFSADQM DVRGGDDDAE 180
  181 WQISQSPTSV IGHSNGDEGL NQPMLELQIN DQRFEDAEEM VHESETKDH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 1zyiA
Description: Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle