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View Structure Prediction Details

Protein: NAC79_ARATH
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC79_ARATH.

Description E-value Query
Range
Subject
Range
gi|30682054, gi|... - gi|30682054|ref|NP_850789.1| ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription f...
396.0 [0..15] [329..1]
gi|66394518, gi|... - gi|66394518|gb|AAY46125.1| NAC domain protein NAC5 [Glycine max], gi|62546191|gb|AAX85982.1| NAC5 pr...
318.0 [0..1] [329..1]
gi|21389174 - gi|21389174|gb|AAM50521.1|AF510215_1 nam-like protein 18 [Petunia x hybrida]
297.0 [0..1] [329..1]
gi|218194979, gi... - gi|218194979|gb|EEC77406.1| hypothetical protein OsI_16171 [Oryza sativa Indica Group], gi|116310448...
gi|115458784, gi... - gi|50924810|ref|XP_472753.1| OSJNBa0072F16.10 [Oryza sativa (japonica cultivar-group)], gi|38344965|...
294.0 [0..8] [311..3]
gi|92874168 - gi|92874168|gb|ABE82475.1| No apical meristem (NAM) protein [Medicago truncatula]
292.0 [0..1] [329..1]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW  60
   61 ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA TGKDKEIFRG KSLVGMKKTL 120
  121 VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI 180
  181 RIGSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.0
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [186-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTGSSLPPLT DSSPYNDKTK TEPVYVPCFS NQAETRGTIL NCFSNPSLSS IQPDFLQMIP  60
   61 LYQPQSLNIS ESSNPVLTQE QSVLQAMMEN NRRQNFKTLS ISQETGVSNT DNSSVFEFGR 120
  121 KRFDHQEVPS PSSGPVDLEP FWNY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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