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View Structure Prediction Details

Protein: JAL31_ARATH
Organism: Arabidopsis thaliana
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAL31_ARATH.

Description E-value Query
Range
Subject
Range
gi|21594017 - gi|21594017|gb|AAM65935.1| putative lectin [Arabidopsis thaliana]
352.0 [0..1] [296..1]

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Predicted Domain #1
Region A:
Residues: [1-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKVEAKGG KGGNQWDDGS DHDAVTKIQV AVGGMGIQYI QFDYVKNGQT EQTPLRGIKG  60
   61 STIPTDPFVI NHPEEHLVSI EIWYKPDGLI QGLRFISNKK TSRFIGYDRG TRSFLQVQDK 120
  121 KIIGFHGSAG DNLNSLGAYF APLTIPLTPA KPLPALGSDD GTAWDDGAYV GVKKVYVGQA 180
  181 QDGISAVKFV YDKSPEEVTG EEHGKSTLLG FEEFVLDYPS EYIIAVEGTY DKIFGSDGSV 240
  241 ITMLRFKTNK QTSPPFGLEA GTAFELKEEG HKIVGFHGRA DALLHKIGVH VRPVSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 1zgrA
Description: Crystal structure of the Parkia platycephala seed lectin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle