| Protein: | gi|110742940, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 377 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110742940, gi....
| Description | E-value | Query Range |
Subject Range |
|
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406.0 | [0..1] | [363..1] |
|
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326.0 | [0..1] | [375..1] |
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323.0 | [0..1] | [376..1] |
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Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MRIRKGSRVE VFSNKEAPYG AWRCAEIVSG NGHTYNVRFY SFQIEHEEAV MEKVPRKIIR 60
61 PCPPLVDVER WDTGELVEVL DNFSWKAATV REELSGHYYV VRLLGTPEEL TFHKVNLRAR 120
121 KSWQDERWVA IGKISGSLKS STLTGSDVHQ KLQPHRNSMP LHEPSVVSAR LLKRPSPYNW 180
181 SECAE
|
| Detection Method: |  |
| Confidence: | 26.0 |
| Match: | 2bkdN |
| Description: | Structure of the N-terminal domain of Fragile X Mental Retardation Protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-256] |
1 11 21 31 41 51
| | | | | |
1 SCTGNPKKMR SLEKEGQQQK VDAISCRPEN RGGKSHVQAS LNNHKTGYCQ IVRVRSKGFS 60
61 ESVRADDCSD S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.695 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.649 | d.17.1 | Cystatin/monellin |
| View | Download | 0.545 | a.65.1 | Annexin |
| View | Download | 0.545 | a.65.1 | Annexin |
| View | Download | 0.505 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.501 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.464 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.371 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.355 | a.4.1 | Homeodomain-like |
| View | Download | 0.322 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.302 | a.4.1 | Homeodomain-like |
| View | Download | 0.282 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.217 | d.214.1 | Hypothetical protein MTH1880 |
| View | Download | 0.201 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
|
Region A: Residues: [257-377] |
1 11 21 31 41 51
| | | | | |
1 DVCSVGSCSA TSYDESNMPP CMLDGSTQQA DSCSSDAESS CGLGEEPRWK HSSVGDGARN 60
61 SCRSELYSYR STLGELFSSG PLSWEQEASL TDLRLSLNIS DDEHLMEVRN LISTGTRSQF 120
121 C
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| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1utuA |
| Description: | Crystal structure of novel protein EMSY truncate |
Matching Structure (courtesy of the PDB): |
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