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View Structure Prediction Details

Protein: gi|9759020, gi|2...
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759020, gi|2....

Description E-value Query
Range
Subject
Range
gi|46805026, gi|... - gi|50910033|ref|XP_466505.1| putative protein kinase [Oryza sativa (japonica cultivar-group)], gi|46...
gi|218191087 - gi|218191087|gb|EEC73514.1| hypothetical protein OsI_07888 [Oryza sativa Indica Group]
273.0 [0..5] [346..11]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK  60
   61 RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ GGTLRKYLLN LRPACLETRV 120
  121 AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET 180
  181 GTYRWMAPEL YSTVTLRLGE KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA 240
  241 FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA 300
  301 SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.522879
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle