YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: AGP11_ARATH
Organism: Arabidopsis thaliana
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGP11_ARATH.

Description E-value Query
Range
Subject
Range
gi|4092885, gi|7... - pir||T31436 DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain - Nosema locustae, gi|4092885|...
137.0 [0..12] [129..1432]

Back

Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLFVVVAL LALAVGTVFA ADAPSAAPTA SPTKSPTKAP AAAPKSSAAA PKASSPVAEE  60
   61 PTPEDDYSAA SPSDSAEAPT VSSPPAPTPE ADGPSSDGPS SDGPAAAESP KSGATTNVKL 120
  121 SIAGTVAAAG FFIFSL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.65
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle