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View Structure Prediction Details

Protein: RUP1_ARATH
Organism: Arabidopsis thaliana
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RUP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
416.0 [0..5] [385..1278]

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Predicted Domain #1
Region A:
Residues: [1-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALFCSEIP NNNIRSSIND LSSSSSYTWP MIMTSSSSSS SSPTIMNIEN IPRCDWDLSL  60
   61 SAVVSSASTG SDAIGAIEFD PTGEIIATGG IARKIRSYRL SSLLESRDDH VTASESYICT 120
  121 PAKLSSLKWR PDFSGRVIGS GDYDGVVTEY DVEKQVPVSE RDEHGGRRIW SVDYTLYNGS 180
  181 LIGASGSDDG TVQMWDPRNG GTLEETVRPG GGAAICSVEF DPFGGSSIAV GCADRNAYVY 240
  241 DIRRLVDPLI VLDGHTKTVT YARFMDSHTI VTGSTDGSLK QWDIDNGRRV VRTYRGHVNS 300
  301 RNFVGLSVWR HGGLVVSGSE NNQVFVYDKR WEEPVWVCGL GHTNRFGSDR RFVSSVCLRQ 360
  361 VDEDWCTLVA GGSDGALEIF SGKQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.522879
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle