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View Structure Prediction Details

Protein: GRS16_ARATH
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRS16_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592395 - gi|21592395|gb|AAM64346.1| unknown [Arabidopsis thaliana]
376.0 [0..1] [293..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAITISSSL HASASPRVVR PHVSRNTPVI TLYSRFTPSF SFPSLSFTLR DTAPSRRRSF  60
   61 FIASAVKSLT ETELLPITEA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSIPSASGVY AVYDKSDELQ FVGISRNIAA SVSAHLKSVP ELCGSVKVGI VEEPDKAVLT  60
   61 QAWKLWIEEH IKVTGKVPPG NKSGNNTFVK QTPRKKSDIR L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2diyA
Description: No description for 2diyA was found.

Predicted Domain #3
Region A:
Residues: [182-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPGRHVELTV PLEELIDRLV KESKVVAFIK GSRSAPQCGF SQRVVGILES QGVDYETVDV  60
   61 LDDEYNHGLR ETLKNYSNWP TFPQIFVKGE LVGGCDILTS MYENGELANI LN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 1ykaA
Description: Solution structure of Grx4, a monothiol glutaredoxin from E. coli.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle