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View Structure Prediction Details

Protein: gi|21592864, gi|...
Organism: Arabidopsis thaliana
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592864, gi|....

Description E-value Query
Range
Subject
Range
GDL62_ARATH - GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=1
426.0 [0..1] [358..2]
gi|115445589, gi... - gi|50906987|ref|XP_464982.1| lipase class 3-like [Oryza sativa (japonica cultivar-group)], gi|478477...
gi|218190502 - gi|218190502|gb|EEC72929.1| hypothetical protein OsI_06776 [Oryza sativa Indica Group]
419.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASDREEFNL CGPTHLTTVD WGNEDHQRCV AACLVQGIYI VEQDRQLKRE GTEALASPWW  60
   61 ESFNFKLIRH LKDDADFSIF GGIFEYKSLQ PDVVDSGVPR YVIAFRGTLT KADSITRDIE 120
  121 LDIHIIRNGL HRTSRFEIAM QAVRSMADSV GASSFWLTGH SLGAAMALLA GKTMGKSGVY 180
  181 IKSLLFNPPY VSPPIERIAN ERVRHGIRFA GSLITAGLAL SRTLKQTQQP QQQQLQLQNL 240
  241 TE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1dt3A
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [243-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPLEALSSWL PNIHVNPGDH LCSEYIGFFE HRGNMEQIGY GAGIVERMAM QHSLGGLLMD  60
   61 AMGVSNAVEV EEPVHVIPSA NLIVNKTISE DYKDAHGIHQ WWRDDQDLVS HIYMYK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle