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View Structure Prediction Details

Protein: MRS23_ARATH
Organism: Arabidopsis thaliana
Length: 484 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS23_ARATH.

Description E-value Query
Range
Subject
Range
MRS21_ARATH - Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1
253.0 [0..6] [483..11]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGARPDEFN FSTNPSTPNT GQPTPTYPAG VGGGGGGRKK GVGVRTWLVL NSSGQSEPKE  60
   61 EGKHSIMRRT GLPARDLRIL DPLLSYPSTV LGRERAIVIN LEHIKAIITA QEVLLLNSKD 120
  121 PSVSPFIDEL QRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILCHHHATKP QEEQNSGGEP HTRVDPAQGE AGTEQSSGDQ GSEAKKDAKQ SLENQDGSKV  60
   61 LPFEFVALEA CLEAASSSLE HEALRLELEA HPALDKLTSK ISTLNLERVR QIKSRLVAIT 120
  121 GRVQKVRDEL EHLLDDDEDM AEMYLTEKLA QKLEDSSNSS MNESDTFEVD LPQGDEDDRL 180
  181 PPEFASEANR DGRYLQANDA HELLMSTQSA LSRNSRGTHT SSTRSAMTNK LDVEELEMLL 240
  241 EAYFVQIDGI LNKLSTLREY VDDTEDYINI MLDDKQNHLL QMGVMLTTAT LVMSAFIAVA 300
  301 GVFGMNITIE LFTDNKHGPS RFIWTVIGGS IGSICLYVGA IGWCKYKRLL E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.221849
Match: 2bbjA
Description: Crystal structure of the CorA Mg2+ transporter
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle