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View Structure Prediction Details

Protein: PDCB3_ARATH
Organism: Arabidopsis thaliana
Length: 184 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDCB3_ARATH.

Description E-value Query
Range
Subject
Range
E133_ARATH - Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2
154.0 [0..17] [143..356]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN  60
   61 TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT TCPFPASASG SGTTTPVTTT 120
  121 PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF 180
  181 YLFS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.60206
Match: PF07983.4
Description: No description for PF07983.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle