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View Structure Prediction Details

Protein: RLF4_ARATH
Organism: Arabidopsis thaliana
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF4_ARATH.

Description E-value Query
Range
Subject
Range
gi|37695573 - gi|37695573|gb|AAR00326.1| rapid alkalinization factor 2 [Solanum chacoense]
132.0 [0..1] [106..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVKMLLIFG LLILAMVAKS VNATYPLTKS CINGQGCIGE DDELESLMDS ETNRRQLARG  60
   61 RRYIGYDALK KNNVPCSRRG RSYYDCKKRR RNNPYRRGCS AITHCYRYAR 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.886057
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.382 N/A N/A a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.337 N/A N/A a.4.1 Homeodomain-like
View Download 0.230 N/A N/A a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle