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View Structure Prediction Details

Protein: gi|15238139, gi|...
Organism: Arabidopsis thaliana
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238139, gi|....

Description E-value Query
Range
Subject
Range
gi|42568891, gi|... - gi|42568891|ref|NP_178402.2| heat shock protein-related [Arabidopsis thaliana], gi|28207060|gb|AAO37...
141.0 [0..10] [249..6]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGETKADFRD MSRIPKVREG FYATNNQFQK AGPKGFVQVK VLENDNLYVR VDLPGVPDDA  60
   61 VRYRVDAVRQ KVVFFSGETL NNGKEGVRQY SGTAGLGCDC CEITGVDAKM KDGVLRMILT 120
  121 RVKVVSKAQD NNNNKCTLTV PPFTGQSGIR LEDHPCLVSG RKGALIGVTK AGGGAHFAVD 180
  181 MPGVSPDDVE VYADEKEIRF KAEIKDVYEH DESGRTYLGS VQSPFPALIS NNTIAWDAEF 240
  241 GVLRIAVIPP DDMTTINNKR NPIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.39794
Match: 2bolA
Description: CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle